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IntGenomicsLab/lrsomatic: Changelog

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

v1.1.0dev - [date]

v1.0.0 - [28 Nov 2025]

Initial release of IntGenomicsLab/lrsomatic, created with the nf-core template.

Added

  • ClairS-TO Module
  • cramino module
  • modkit pileup module
  • mosdepth module
  • minimap2/index module
  • minimap2/align module
  • pigz module
  • samtools/cat module
  • samtools faidx module
  • bam_stats_samtools subworkflow
  • mosdepth added to workflow
  • add longphase/tag and longphase/phase modules

Fixed

  • New channel structure
  • No longer possible to have duplicated naming after samtools cat
  • restructured minimap2

Dependencies

Deprecated